Department Home

qr-code info
  • X-ray Lab Home
  • Data Collection Queue
  • News Forum
  • Software List
  • Getting Started...
  • X-ray Lab Guides
  • X-ray Links
  • Calculations
  • Search
  • Internal use only:
  • Data Collection Queue Sign-up
  • E-mail list archives
  • Other:
  • Software
    File Transfer
  • Miscellaneous Links
  • Facility Manager
  • Crystallography Software

    N.B. These pages are under almost continual re-construction! To stay current on the state of the software, subscribe to the X-rayLab email list.

    The old software pages are still available here, but may not be kept up to date.

    Click on a link below to see the software within that category


    1. All software
    2. Crystallography
    3. Miscellaneous
    4. Modelling
    5. Molecular Biology and Biochemistry

    Click on program name for more information

    ProgramLicense typeWeb pageManualVersionsOperating systems/prog/setup name
    Crystallography Data processing
    DPSFOSSWebManual2.0, 2, 1.31GNU/Linux IRIXdps
    HKLproprietaryWebManual2000_696, 2000_695b, 2000_692iGNU/Linux IRIXhkl
    LaueViewunknown checkingNoneManual2.5IRIXlaueview
    MosflmFOSSWebManual6.2.3, 6.2.2, 6.11, 6.10, 6.1GNU/Linux IRIXmosflm
    novel_Runknown checkingNoneManualN/AGNU/Linuxnovel
    StrategyproprietaryWebManualN/AIRIX strategy
    XDSproprietaryWebManual12.31.2008GNU/Linuxxds
    Structure determination
    AMoReFOSSNoneManual9, 8, 7, 10, oldGNU/Linuxamore
    ARP/wARPFOSSWebManual6.1,GNU/Linux IRIXarp
    CCP4FOSSWebManual6.0.2, 6.0.1, 5.0.2, 5.0GNU/Linux IRIXccp4
    cctbxFOSSWebManual6.0.2, 6.0.1, 5.0.2, 5.0, 3.5GNU/Linuxccp4i
    ChoochFOSSWebManual5.0.1GNU/Linuxchooch
    CNSacademicWebManualisac, 1.2, 1.1, 1.0, 1, 0.9aGNU/Linux IRIXcns
    CONVROTunknown checkingNoneNoneN/AGNU/Linux IRIXconvrot
    EPMRunknown checkingNoneManual2.5GNU/Linux IRIXepmr
    FFFEARunknown checkingWebManual1.9, 1.1IRIXfffear
    MADSYSunknown checkingNoneManualN/AGNU/Linux IRIXmadsys
    MAIDFOSSWebManual27may05,GNU/Linux IRIXmaid
    MAPUTILSunknown checkingWebNoneN/AIRIXmaputils
    MOLREPFOSSWebManual7.1, 7.0, 6.1GNU/Linux IRIXmolrep
    phaserFOSSWebManual2.1.1GNU/Linuxphaser
    PHENIXacademicWebManual1.3rc2GNU/Linuxphenix
    SHELXacademicWebManual97IRIXshelx
    SnBproprietaryWebManual2.1GNU/Linux IRIXsnb
    SOLVE/RESOLVEproprietaryWebManual2.13, 2.06, 2.03, 2.02GNU/Linux IRIXsolve
    USFproprietaryWebManualN/AGNU/Linux IRIXusf
    X-ploracademicWebManualnih, isac, 3.8_isac, 3.851GNU/Linux IRIXxplor
    XtalViewunknown checkingWebManual4.1, 4.0, 3.2GNU/Linux IRIXxtalview
    Structure fitting
    CootFOSSWebManual0.1.3GNU/Linuxcoot
    OproprietaryWebManual9,GNU/Linux IRIXo
    xfitunknown checkingWebManual4.0,GNU/LinuxN/A
    Structure quality
    DDQunknown checkingWebManual2.0GNU/Linux IRIXddq
    ProcheckFOSSWebManualN/AGNU/Linuxprocheck
    WHATCHECKunknown checkingWebNone1.1.14, 1.1.15IRIXwhatcheck
    Johns Hopkins University School of Medicine | Department of Biophysics and Biophysical Chemistry
    Department Faculty | Biophysics Graduate Program Admissions Information | General Information
    Department Courses | Department Facilities | Department News | Home